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Custom targeted Methyl-Seq enables precision methylation analysis

Application note

Use of a Modified Agilent SureSelect XT HS2 Target Enrichment Procedure for Analysis of Methylation Status in a Model Organism

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Methylation analysis unlocks epigenetic insight, providing you with valuable information on various gene expression alterations found within DNA. Yet, genome-wide DNA methylation analysis by next-generation sequencing (NGS) can be challenging. Therefore, it’s essential to have a streamlined and reliable targeted methylation sequencing (Methyl-Seq) workflow that can provide more insight on the methylation patterns that matter to you.

This application note describes an autism spectrum disorder study using a modified protocol with  Agilent SureSelect XT HS2 library prep and SureSelect XT Methyl-Seq target enrichment to examine methylation status in murine model organisms exposed to valproic acid.

You’ll learn:

  • Details on a Methyl-Seq workflow that combines the SureSelect XT HS2 library prep and SureSelect XT Methyl-Seq overnight hybrid capture, followed by bisulfite conversion.
  • Benefits of a custom panel design for the SureSelect Methyl workflow leading to reduced sequencing costs combined with higher sequencing depth.
  • Advantages of combining two complementary methylation data analysis methods.

See how Agilent SureSelect Methyl-Seq solutions can empower your genomics research.

See what SureSelect reagents can do for your NGS research

SureSelect XT HS2 DNA reagent kit

Our cutting-edge DNA library preparation and target enrichment solution for Illumina sequencing provides a streamlined workflow and excellent performance.

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SureSelect XT Methyl-Seq library preparation kit

This library preparation kit enables targeted methylation sequencing to determine the methylation status of select known differentially methylated regions.

Explore the kit

For Research Use Only. Not for use in diagnostic procedures.

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